CDS

Accession Number TCMCG051C28367
gbkey CDS
Protein Id XP_024464515.1
Location join(8541151..8541338,8541610..8541754,8541834..8541949,8542039..8542115,8542789..8543276,8544187..8544330,8544767..8546883,8547372..8547432,8548009..8548050)
Gene LOC7490072
GeneID 7490072
Organism Populus trichocarpa

Protein

Length 1125aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024608747.1
Definition DNA repair protein REV1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category L
Description Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template-dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K03515        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03460        [VIEW IN KEGG]
map03460        [VIEW IN KEGG]
GOs GO:0000002        [VIEW IN EMBL-EBI]
GO:0000731        [VIEW IN EMBL-EBI]
GO:0002200        [VIEW IN EMBL-EBI]
GO:0002206        [VIEW IN EMBL-EBI]
GO:0002376        [VIEW IN EMBL-EBI]
GO:0002377        [VIEW IN EMBL-EBI]
GO:0002440        [VIEW IN EMBL-EBI]
GO:0002520        [VIEW IN EMBL-EBI]
GO:0002565        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003887        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006301        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007005        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009411        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010224        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016444        [VIEW IN EMBL-EBI]
GO:0016445        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016779        [VIEW IN EMBL-EBI]
GO:0017125        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019985        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032042        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034061        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0035822        [VIEW IN EMBL-EBI]
GO:0035861        [VIEW IN EMBL-EBI]
GO:0042276        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043504        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070987        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071897        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090734        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGTTTTGATTCTTCGCGATCCTCCTCTGCCAATTCAAGTCGAAAATCAAAAAGAGGCTTGAATAATTCGAATTCTTCAAATAATAAAAATAGCAAGCAAAAAACCCTCGGCATGGGTCGGGGTGCCAACTCTCTCTCCTCCTCTCGCCCATCCTTTCGCAACTCTCCTTTCTCCAATTTCGGCAGTTATATGGTAGAGAAGAATAGGAAGCTTCAACACCAATTTGAAGCAGAGGCTTCCACTTCTTCCCATCCTGGTTCGAGTTCCGGGAAGCTGATTTTTCAAGGAGTCTCTATTTTTATTGATGGTTTCACAATTCCTTCGAACCAGGAACTGCGAGCTTACATGTTGAAGTATGGTGGGCGATTTGCGAATTACTTTTCTAGGCATCAAGTTACGCATATAATCTGTAGCAGTCTTCCCGATAGTAAAATCAAGAACCTGAGGTCATTTAGTGGTGGGCTCCCAGTGGTCAAACCTGAATGGATTTTGGATTCCATTGTTGCTAACAAACTTTTGAATTGGTTTCCTTACCAGCTCAACCAGCTTGCTAATAACCAACCAAAATTATCAGCCTTCTTTACCCTGAAAAGTAACCCAGTCCCGGAGAATGTTTTGACCGATGAAGTTTGTCAAGTGAACCTGGATCCAATTTTGAAGGGTGGCACCACAAAGGATGTGTATATTTCCGAAGTGGATGAACCCGTGAGATTTGCCGAGCAAGCCGGCGAACTACTTGATGATCCTAATCATCAACTCGAGGAGCTAAATGGTAGTAGTGGAAAATCTGCAGAAGTAAAGATGGCAGAATTTGGTAGTAGTGATGCAGAATATGGAAACAGTGTAAACAGCAAGCATCAATCTGGTCCAGATCTATTTTCTGCTTCAGTTAGTGGCTATTGCTTACACAATCAACGTTCGGATGGATCACTGAGTTCAGAACCTAGTGGGCCTTCAAATCGACGTCATTCAACTCTTGGGGATCCCAATTTTGTGGAGAATTACTTTAAGAGTTCAAGGCTGCACTTCATAGGAACCTGGAGAAGTCGGTACCGAAAGCGTTTTCCTAGCTCATCAAGTGAATTTAAGTGCAGAAGCTCAGATCTCAACACCTCTGATAATTCTAACAAGTCTACTATTATCCATGTTGACATGGACTGCTTTTTTGTTTCTGTAGTCATCCGGAATCATCCAGAGTTACATGATAAGCCTGTAGCAGTATGCCATTCTGACAACCCAAAAGGAACAGCTGAAATTTCATCGGCAAACTACCCTGCCCGAAACTATGGAGTTAAGGCTGGGATTTTCGTTAGAGATGCCAAAGCCCTTTGTCCGCAACTAGTCATTTTCCCTTACAATTTCAAAGCTTATGAAGAAGTAGCTGATCAGCTTTACAACATCTTGCATAAGCACTGCCACAAAGTGCAGGCCATAAGCTGTGATGAAGCATTTTTAGACATCACGGAAAAAGATATGGGAGATCCTGAGCTTTTAGCTTCAACAATAAGGAAAGAGATTTTTGACACAACAGGATGCACTGCAAGTGCTGGGATAGCTGGGAATATGCTCATGGCTCGACTTGCCACTAGAAGTGCTAAACCCAATGGTCAATGCTATATCCCTTCAGTAAGTGTGGATGAGTATCTACACAAACTTCCAATTAAGGCACTTCCAGGAATAGGGCACGTTTTGGAGGAGAAGTTGAAGAAGCAAAATGTTTGGACTTGTGGACAGTTACGCCTGATTTCCAAGGAATCTCTTCAAAAGGATTTTGGACTGAAAACTGGAGAAATGTTGTGGAACTATAGTAGAGGAGTTGATAATAGACTGGTTGGTAACATTCAGGAAAGCAAGACTATAGGTGCTGAAGTCAACTGGGGTGTCAGGTTCAAGGATCTGCAAGATAGTCAATGTTTCCTATTAAATCTTTGCAAGGAGGTTTCTTTCCGTTTGCAAGGATGTAGAGTGCAAGGGCGCACATTTACCCTTAAGATAAAGAAGAGAAGAAAAGATGCCGGTGAACCTGCTAAATATATGGGCTGCGGGGACTGTGAGAATCTGAGCCACTCCATGACAGTTCCTATTGCTATTGATGATGTTGAAGCTCTTCAAAGGATAACAAAGCAGCTCTTTGGGTCTTTCTGCTTGGATGTCAAGGACATTCGGGGTGTTGGCTTGCAAGTTTCCAAGCTTGAAAATGCAGACCCTTCTAAACAAGTGCTTGAAAGAAACTCTTTGAGGTCATGGCTCACCTCTTCCTCAGCAACTACTGAAAAAGGGTGTAGCATCAACAGTATGGACAAAGAGAGGGCTAGGATAGATTCTGAGGTGAAGAACATGATTGGAACTTCAGGTCAATTATTTCCTGACCAGACTGGGTTTTCTGCTCAAGTGGACACCAATTCATCAAGTGGTATTTCAGCACCACCACCTTTATCTCATCTTGATATGGGAGTTGTCAAGAGTCTTCCAGCAGAACTTTTTTCTGAGTTAAATGAAATTTATGGAGGGAAGTTAACAGATTTCATTGCTAAAAGCAGTGTTGCAAGTGAAAACATCAACAGTTATCCTAGCACCCCTTCAGCTGAAGGGCAAGAGCTTGCAGTTGACGGTGGTGAGGGACCTCTTGCATCTAATATGATTCCCCTTGACTTTGTAATGGTGGAAAATAGGGCAAAACAGCATATGATTGAGGAAGCACAAGCAGCACCTTCTGGGGCTGGATTGCAGAATGAGGCCATTTCCTCTGTAAGCCCTAACAACACTGATTTAATGCCTTTATCTCTAAGTCAAGTGGATGTATCAGTGTTACAACAATTGCCAGAAGAATTGAGAGGTGACATACTTGGACAGCTTCCTGCGCACAGAAAACAAGAGTTGACTTCAAATGCTGGATCACACCCTCTTTCAGAAAATCCTGAGGGAACTTTGATTATTAATATCACTGAGAATCAATCAAATTCCATTGCCTCTGTTTTGAATACTAATCTTTGGATTGGGAGCCCCCCACAGTGGGTTGATAAGTTCACAGTCAGCAGCTGCTTGATATTAAAGACTTTGGCAGAGTTGTATTACAAATTGGGATCAACTGGAAGTCTATCTCCTATACTGCAACGCATAATTTCTGAATGTCTATATCCTTTGGATGAAAATGGTGATGCTTGTGGTGAGGAAGCTACATATGATTTGTGTGAGCTTTTCAAGCAATATGTTAAACTAAAGACGGAGCTAGACCTCGAAGAAATTTATGTTTGTTTCTGTCTTCTTAGAAGGTTGTCGACCAAGTCAAAATTCCTCCTACAAGTATACAATATCGTCTTTCCTTACCTTCAGGCATCTGTTGGAGAAAATTATGGAGGAGGTTTGCATATTTAA
Protein:  
MSFDSSRSSSANSSRKSKRGLNNSNSSNNKNSKQKTLGMGRGANSLSSSRPSFRNSPFSNFGSYMVEKNRKLQHQFEAEASTSSHPGSSSGKLIFQGVSIFIDGFTIPSNQELRAYMLKYGGRFANYFSRHQVTHIICSSLPDSKIKNLRSFSGGLPVVKPEWILDSIVANKLLNWFPYQLNQLANNQPKLSAFFTLKSNPVPENVLTDEVCQVNLDPILKGGTTKDVYISEVDEPVRFAEQAGELLDDPNHQLEELNGSSGKSAEVKMAEFGSSDAEYGNSVNSKHQSGPDLFSASVSGYCLHNQRSDGSLSSEPSGPSNRRHSTLGDPNFVENYFKSSRLHFIGTWRSRYRKRFPSSSSEFKCRSSDLNTSDNSNKSTIIHVDMDCFFVSVVIRNHPELHDKPVAVCHSDNPKGTAEISSANYPARNYGVKAGIFVRDAKALCPQLVIFPYNFKAYEEVADQLYNILHKHCHKVQAISCDEAFLDITEKDMGDPELLASTIRKEIFDTTGCTASAGIAGNMLMARLATRSAKPNGQCYIPSVSVDEYLHKLPIKALPGIGHVLEEKLKKQNVWTCGQLRLISKESLQKDFGLKTGEMLWNYSRGVDNRLVGNIQESKTIGAEVNWGVRFKDLQDSQCFLLNLCKEVSFRLQGCRVQGRTFTLKIKKRRKDAGEPAKYMGCGDCENLSHSMTVPIAIDDVEALQRITKQLFGSFCLDVKDIRGVGLQVSKLENADPSKQVLERNSLRSWLTSSSATTEKGCSINSMDKERARIDSEVKNMIGTSGQLFPDQTGFSAQVDTNSSSGISAPPPLSHLDMGVVKSLPAELFSELNEIYGGKLTDFIAKSSVASENINSYPSTPSAEGQELAVDGGEGPLASNMIPLDFVMVENRAKQHMIEEAQAAPSGAGLQNEAISSVSPNNTDLMPLSLSQVDVSVLQQLPEELRGDILGQLPAHRKQELTSNAGSHPLSENPEGTLIINITENQSNSIASVLNTNLWIGSPPQWVDKFTVSSCLILKTLAELYYKLGSTGSLSPILQRIISECLYPLDENGDACGEEATYDLCELFKQYVKLKTELDLEEIYVCFCLLRRLSTKSKFLLQVYNIVFPYLQASVGENYGGGLHI